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BaseInfo

ncRNA ID novel_gar_miR1866
Species Gossypium arboreum
Class miRNA
Genome position Chr7:38832500-38832698 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 176 - AUGUUGGAUCAAUGAGCAAACGGG - 199
Stem-loop(if miRNA) --            U       CG   - A    A         C        G            -     CCU  U   -CU       G    AUCCAC
  AUGUUGGAUCAA GAGCAAA  GGU C UUCU UUAAAAAUU CAUCUAUU CUACUGUUAAAA UUGGU   UG AUG   AGAAUGA UAGA      G
  |||||||||||| |||||||  ||| | |||| ||||||||| |||||||| |||||||||||| |||||   || |||   ||||||| ||||      U
  UGCAAUCUGGUU CUCGUUU  CCA G AAGA AAUUUUUAA GUAGAUAA GAUGAUAAUUUU GACCA   AC UAC   UCUUAUU AUCU      G
UA            U       AA   A A    C         A        A            U     --U  -   CUU       G    GUCAAU
Stem-loop sequence AUGUUGGAUCAAUGAGCAAACGGGUCAUUCUAUUAAAAAUUCCAUCUAUUGCUACUGUUAAAAUUGGUCCUUGUAUGCUAGAAUGAGUAGAAUCCACGUGUAACUGUCUAGUUAUUCUUUCCAUCAUACCAGUUUUUAAUAGUAGAAAUAGAUGAAAUUUUUAACAGAAAGAACCAAUUUGCUCUUUGGUCUAACGUAU