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BaseInfo

ncRNA ID	ath-miRf11127-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - CCUACUCGACCAGGGGGUCGAGUG - NA
Stem-loop(if miRNA)	G A   -CC          AG            UCU   GAGG GGU A GUC   CUACUCGACC  GGGGUCGAGUGG   GUU    U ||| | |||   ||||||||||  ||||||||||||   ||| CUA U CAG   GGUGAGCUGG  CUCCAGCUCAUC   CGA    C    G A   UUU          GG            -UU   AGUU
Stem-loop sequence	GGUGAAGUCCCCUACUCGACCAGGGGGUCGAGUGGUCUGUUGAGGUCUUGAAGCUUCUACUCGACCUCGGGGUCGAGUGGUUUGACAUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   |||||||||||||||||||||||* targets:91   CACUCGACCCCCUGGUCGAGUAGC   114 Target Full Sequence	1.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   |||||||||||||||||||||||* targets:125   CACUCGACCCCCUGGUCGAGUAGA   148 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   |||||||||||||||||||||||* targets:500   CACUCGACCCCCUGGUCGAGUAGA   523 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   |||||||||||||||||||||||* targets:500   CACUCGACCCCCUGGUCGAGUAGA   523 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   |||||||||||||||||||||||* targets:1572   CACUCGACCCCCUGGUCGAGUAGA   1595 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   ||||||||||||||||||||||** targets:231   CACUCGACCCCCUGGUCGAGUAUC   254 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   =|||||||||||||||||||||** targets:182   UACUCGACCCCCUGGUCGAGUAUC   205 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   ||||||||||||||||||||||** targets:231   CACUCGACCCCCUGGUCGAGUAUC   254 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   =|||||||||||||||||||||** targets:182   UACUCGACCCCCUGGUCGAGUAUC   205 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   =|||||||||||||||||||||** targets:309   UACUCGACCCCCUGGUCGAGUAUC   332 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   |||||||||||*|||||||||||* targets:490   CACUCGACCCCGUGGUCGAGUAGA   513 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   =||*||||||||||||||||||** targets:584   UACYCGACCCCCUGGUCGAGUAUC   607 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUCC   1   ||||||||||||*||||||||||* targets:1105   CACUCGACCCCCAGGUCGAGUAGA   1128 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget