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BaseInfo

ncRNA ID novel_gar_miR1861
Species Gossypium arboreum
Class miRNA
Genome position Chr7:76337171-76337228 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AGAAAAUGCUUCUGAUUGGACGCG - 24
Stem-loop(if miRNA) --U      CU   U        A   GA
   GUCUAG  GGA GCGUUUUC UUG  U
   ||||||  ||| |||||||| |||  C
   CAGGUU  UCU CGUAAAAG AAU  U
GCG      AG   U        -   AU
Stem-loop sequence UGUCUAGCUGGAUGCGUUUUCAUUGGAUCUUAUAAGAAAAUGCUUCUGAUUGGACGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017757036.1
ncRNA:24   GCGCAGGUUAGUCUUCGUAAAAGA   1
  ****||||||*||||||*||||||
targets:520   GUAUUCCAAUAAGAAGCUUUUUCU   543

2.5 PREDICTED: Gossypium arboreum pentatricopeptide repeat-containing protein At1g06140, mitochondrial (LOC108457856), mRNA pentatricopeptide repeat-containing protein At1g06140, mitochondrial(LOC108457856) coding protein psRNATarget