ncRNA ID | novel_gar_miR1861 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr7:76337171-76337228 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAAAUGCUUCUGAUUGGACGCG - 24 |
Stem-loop(if miRNA) |
--U      CU   U        A   GA    GUCUAG  GGA GCGUUUUC UUG  U    ||||||  ||| |||||||| |||  C    CAGGUU  UCU CGUAAAAG AAU  U GCG      AG   U        -   AU |
Stem-loop sequence | UGUCUAGCUGGAUGCGUUUUCAUUGGAUCUUAUAAGAAAAUGCUUCUGAUUGGACGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017757036.1 |
|
2.5 | PREDICTED: Gossypium arboreum pentatricopeptide repeat-containing protein At1g06140, mitochondrial (LOC108457856), mRNA | pentatricopeptide repeat-containing protein At1g06140, mitochondrial(LOC108457856) | coding protein | psRNATarget |