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BaseInfo

ncRNA ID novel_gar_miR1858
Species Gossypium arboreum
Class miRNA
Genome position Chr7:104415623-104415744 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 99 - AUGAUAGACUAUGUAUGCAUGACU - 122
Stem-loop(if miRNA) --     AG         -   U  C          UAAA   A  AAA   -AUG     AAAU
  AUGAU  ACUAUGUAU GCA GA UUGUACAUUU    GUA CU   AGC    AGUUC    A
  |||||  ||||||||| ||| || ||||||||||    ||| ||   |||    |||||    A
  UACUG  UGAUAUAUA UGU UU AACAUGUGGG    CGU GA   UCG    UUAAG    A
CU     --         A   U  C          -UUA   -  ---   AAAA     GAAU
Stem-loop sequence AUGAUAGACUAUGUAUGCAUGACUUGUACAUUUUAAAGUAACUAAAAGCAUGAGUUCAAAUAAAUAAGGAAUUAAAAGCUAGUGCAUUGGGUGUACAACUUUUGUAAUAUAUAGUGUCAUUC