ncRNA ID | novel_gar_miR1853 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:52633050-52633209 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUGGGCUAUCAUGUAGGACCGUC - 24 |
Stem-loop(if miRNA) |
--UA                       -     A   CC           --CCA  ---U   GU   GA    A     UU     GUCUUACAUGGUAGUCUAAAUGA UUUUA AUG  AAUUUAGAUGC     GU    GUU  GAU  AAAU UAUUU  U     ||||||||||||||||||||||| ||||| |||  |||||||||||     ||    |||  |||  |||| |||||  A     CAGGAUGUACUAUCGGGUUUACU AAAAU UAC  UUGAAUCUACG     CA    CAA  UUA  UUUA AUAAA  A CUGC                       U     C   AC           AAAUG  UUGU   GU   -A    A     UU |
Stem-loop sequence | UAGUCUUACAUGGUAGUCUAAAUGAUUUUAAAUGCCAAUUUAGAUGCCCAGUUGUUGUGAUGAAAAUAUAUUUUUUAAUUAAAUAAAUUUAAUUUGAACUGUUACGUAAAGCAUCUAAGUUCACAUCUAAAAUUCAUUUGGGCUAUCAUGUAGGACCGUC |