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BaseInfo

ncRNA ID novel_gar_miR1853
Species Gossypium arboreum
Class miRNA
Genome position Chr12:52633050-52633209 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - UUUGGGCUAUCAUGUAGGACCGUC - 24
Stem-loop(if miRNA) --UA                       -     A   CC           --CCA  ---U   GU   GA    A     UU
    GUCUUACAUGGUAGUCUAAAUGA UUUUA AUG  AAUUUAGAUGC     GU    GUU  GAU  AAAU UAUUU  U
    ||||||||||||||||||||||| ||||| |||  |||||||||||     ||    |||  |||  |||| |||||  A
    CAGGAUGUACUAUCGGGUUUACU AAAAU UAC  UUGAAUCUACG     CA    CAA  UUA  UUUA AUAAA  A
CUGC                       U     C   AC           AAAUG  UUGU   GU   -A    A     UU
Stem-loop sequence UAGUCUUACAUGGUAGUCUAAAUGAUUUUAAAUGCCAAUUUAGAUGCCCAGUUGUUGUGAUGAAAAUAUAUUUUUUAAUUAAAUAAAUUUAAUUUGAACUGUUACGUAAAGCAUCUAAGUUCACAUCUAAAAUUCAUUUGGGCUAUCAUGUAGGACCGUC