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BaseInfo

ncRNA ID	novel_gar_miR1847
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:54403918-54403985 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586
Length	24
Mature sequence(if miRNA)	1 - AAAACGACGUCGUUUUGGUGGCCU - 24
Stem-loop(if miRNA)	--    GGG                 A  C   UA   GCUA   CGAAACGACGUCGUUUU GG AUU  A   ||||   ||||||||||||||||| || |||  G   CGGU   GUUUUGCUGCAGCAAAA CC UGA  G UC    --G                 C  -   CC
Stem-loop sequence	GCUAGGGCGAAACGACGUCGUUUUAGGCAUUUAAGGCCAGUCCCAAAACGACGUCGUUUUGGUGGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017791923.1	ncRNA:24   UCCGGUGGUUUUGCUGCAGCAAAA   1   *|||=||||||||||||*|||||* targets:1017   CGGCUACCAAAACGACGACGUUUA   1040 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized acetyltransferase At3g50280-like (LOC108487550), mRNA	uncharacterized acetyltransferase At3g50280-like(LOC108487550)	coding protein	psRNATarget
XM_017790898.1	ncRNA:24   UCCGGUGGUUUUGCUGCAGCAAAA   1   ***|||=|||||||*||||||||| targets:255   UAACCAUCAAAACGUCGUCGUUUU   278 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108486706 (LOC108486706), mRNA	uncharacterized LOC108486706(LOC108486706)	coding protein	psRNATarget
XM_017780384.1	ncRNA:24   UCC-----GGUGGUUUUGCUGCAGCAAAA   1   =||-----||*|||||||||*|||||||| targets:35   GGGUUCUUCCCCCAAAACGAAGUCGUUUU   63 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108477916 (LOC108477916), mRNA	uncharacterized LOC108477916(LOC108477916)	coding protein	psRNATarget