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BaseInfo

ncRNA ID novel_gar_miR1846
Species Gossypium arboreum
Class miRNA
Genome position Chr6:50876793-50876960 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AGGAGCUGAAAAUCUCGCGACUGA - 24
Stem-loop(if miRNA) --  G         UC      CUGAUCA   GUC  ---  CUC  GAAAUCCAAUACCAGAAAACUAGAUGACAUUGAAAUAAAUGAUU
  AG AGCUGAAAA  UCGCGA       UCU   CA   GG   GA                                            C
  || |||||||||  ||||||       |||   ||   ||   ||
  UC UCGAUUUUU  AGCGCU       AGA   CG   GG   CU                                            G
AA  G         UA      -----AC   ---  UUU  ---  CCAUGGAGCCUCAAUCUAUAUCGUUUUUUCAUAAGAAGUCCCUU
Stem-loop sequence AGGAGCUGAAAAUCUCGCGACUGAUCAUCUGUCCAGGCUCGAGAAAUCCAAUACCAGAAAACUAGAUGACAUUGAAAUAAAUGAUUCGUUCCCUGAAGAAUACUUUUUUGCUAUAUCUAACUCCGAGGUACCUCGGUUUGCAGACAUCGCGAAUUUUUUAGCUGCUAA