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BaseInfo

ncRNA ID novel_gar_miR1841
Species Gossypium arboreum
Class miRNA
Genome position Chr6:891389-891575 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AUAAGGAUGACGUGGAAUCACAGU - 24
Stem-loop(if miRNA) --                       UC          A    UA               - -              CA     AG  A   UUG
  UGUGAUUCCAUGUUAUCUUUAUC  UUUCCAAUGG AGAA  ACAAAUUAGAUUUUU C CUUUUGAUUUUCAG  UUUUU  UU GAU   A
  |||||||||||||||||||||||  |||||||||| ||||  ||||||||||||||| | ||||||||||||||  |||||  || |||   A
  ACACUAAGGUGCAGUAGGAAUAG  AAAGGUUACC UCUU  UGUUUAGUCUAAAAA G GAGAACUAAAAGUU  AAAAA  AA CUG   U
UG                       UA          C    GC               C A              AA     GA  A   UUU
Stem-loop sequence UGUGAUUCCAUGUUAUCUUUAUCUCUUUCCAAUGGAAGAAUAACAAAUUAGAUUUUUCCUUUUGAUUUUCAGCAUUUUUAGUUAGAUUUGAAUUUUGUCAAAAGAAAAAAAUUGAAAAUCAAGAGAGCAAAAAUCUGAUUUGUCGUUCUCCCAUUGGAAAAUGAUAAGGAUGACGUGGAAUCACAGU