ncRNA ID | novel_gar_miR1841 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:891389-891575 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAAGGAUGACGUGGAAUCACAGU - 24 |
Stem-loop(if miRNA) |
--                       UC          A    UA               - -              CA     AG  A   UUG   UGUGAUUCCAUGUUAUCUUUAUC  UUUCCAAUGG AGAA  ACAAAUUAGAUUUUU C CUUUUGAUUUUCAG  UUUUU  UU GAU   A   |||||||||||||||||||||||  |||||||||| ||||  ||||||||||||||| | ||||||||||||||  |||||  || |||   A   ACACUAAGGUGCAGUAGGAAUAG  AAAGGUUACC UCUU  UGUUUAGUCUAAAAA G GAGAACUAAAAGUU  AAAAA  AA CUG   U UG                       UA          C    GC               C A              AA     GA  A   UUU |
Stem-loop sequence | UGUGAUUCCAUGUUAUCUUUAUCUCUUUCCAAUGGAAGAAUAACAAAUUAGAUUUUUCCUUUUGAUUUUCAGCAUUUUUAGUUAGAUUUGAAUUUUGUCAAAAGAAAAAAAUUGAAAAUCAAGAGAGCAAAAAUCUGAUUUGUCGUUCUCCCAUUGGAAAAUGAUAAGGAUGACGUGGAAUCACAGU |