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BaseInfo

ncRNA ID novel_gar_miR1833
Species Gossypium arboreum
Class miRNA
Genome position Chr6:72785956-72786046 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 23
Mature sequence(if miRNA) 69 - AGAAAGCUCUUGAAUGUUCGGUU - 91
Stem-loop(if miRNA) A   -     U        C  UUACUUGG     A      -AAG UA
 GAA AGCUC UGAAUGUU GG        GGAAG AAAUUG    G  A
 ||| ||||| |||||||| ||        ||||| ||||||    |
 CUU UUGAG ACUUGUAG UC        UCUUC UUUGAU    C  G
-   C     U        U  ------UA     G      GGUA UU
Stem-loop sequence AGAAAGCUCUUGAAUGUUCGGUUACUUGGGGAAGAAAAUUGAAGGUAAGUUCAUGGUAGUUUGCUUCUAUCUUGAUGUUCAUGAGUUCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017788392.1
ncRNA:23   UUGGCUUGUAAGUUCUCGAAAGA   1
  =|==*|=|*||||||||||||||
targets:322   GAUUCAGCUUUCAAGAGCUUUCU   344

3.0 PREDICTED: Gossypium arboreum dolichol kinase EVAN-like (LOC108484565), mRNA dolichol kinase EVAN-like(LOC108484565) coding protein psRNATarget