ncRNA ID | novel_gar_miR1826 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:92100750-92100822 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR959750 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUGGAGGAGUUGGAAAGAUU - 20 |
Stem-loop(if miRNA) |
---AU                    GA   UUCUCUG      GGAGGAGUUGGAAAGAUUUU  AUU       U      ||||||||||||||||||||  |||      CCUCCUUAACCUUUCUAAAA  UAA       A CUUAC                    AG   UAAUUUU |
Stem-loop sequence | AUGGAGGAGUUGGAAAGAUUUUGAAUUUUCUCUGUAUUUUAAUAAUGAAAAAUCUUUCCAAUUCCUCCCAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017749243.1 |
|
0.0 | PREDICTED: Gossypium arboreum zinc finger CCCH domain-containing protein 15-like (LOC108451570), mRNA | zinc finger CCCH domain-containing protein 15-like(LOC108451570) | coding protein | psRNATarget | |||||||||
XM_017777988.1 |
|
2.5 | PREDICTED: Gossypium arboreum pentatricopeptide repeat-containing protein At1g03540 (LOC108475970), mRNA | pentatricopeptide repeat-containing protein At1g03540(LOC108475970) | coding protein | psRNATarget |