ncRNA ID | novel_gar_miR1823 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:4559201-4559284 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR959748 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGCUGUGAUGAUUAUAUUAGAAU - 24 |
Stem-loop(if miRNA) |
--     -   A     AUA     A     GAAAAUUUAAUGA   UUGCU GUG UGAUU   UUAGA UUUAU             A   ||||| ||| |||||   ||||| |||||   AACGA UAC AUUGG   AGUCU AGCUG             A AC     G   -     -CG     -     UACCAACAGUUAC |
Stem-loop sequence | UUGCUGUGAUGAUUAUAUUAGAAUUUAUGAAAAUUUAAUGAAACAUUGACAACCAUGUCGAUCUGAGCGGUUACAUGAGCAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017759139.1 |
|
2.5 | PREDICTED: Gossypium arboreum glycine-rich cell wall structural protein 2-like (LOC108459735), mRNA | glycine-rich cell wall structural protein 2-like(LOC108459735) | coding protein | psRNATarget |