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BaseInfo

ncRNA ID	ath-miRf11123-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - AAUCGACCAGGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)	A       G            UGUU    AG G GCUA UCGACCA GGGGUCGAGUGG    GUGA  U G |||| ||||||| ||||||||||||    ||||  | UGGU AGCUGGU CUCCAGCUCAUC    UACU  A G     G       G            ----    GA G
Stem-loop sequence	GCUAAUCGACCAGGGGGUCGAGUGGUGUUGUGAAGUGGGGAAGUCAUCUACUCGACCUCGUGGUCGAGUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   |||||||||||||||||||||*| targets:89   ACCACUCGACCCCCUGGUCGAGU   111 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   |||||||||||||||||||||*| targets:123   ACCACUCGACCCCCUGGUCGAGU   145 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   |||||||||||||||||||||*| targets:498   ACCACUCGACCCCCUGGUCGAGU   520 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   |||||||||||||||||||||*| targets:498   ACCACUCGACCCCCUGGUCGAGU   520 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   =||||||||||||||||||||*| targets:229   GCCACUCGACCCCCUGGUCGAGU   251 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   *|=||||||||||||||||||*| targets:180   UCUACUCGACCCCCUGGUCGAGU   202 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   =||||||||||||||||||||*| targets:229   GCCACUCGACCCCCUGGUCGAGU   251 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   *|=||||||||||||||||||*| targets:180   UCUACUCGACCCCCUGGUCGAGU   202 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   |=|||||||||||||||||||*| targets:1570   AUCACUCGACCCCCUGGUCGAGU   1592 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   UGG--UGAGCUGGGGGACCAGCUAA   1   |||--||||||||||||||||||*| targets:305   ACCUUACUCGACCCCCUGGUCGAGU   329 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   ===||||*|||||||||||||*| targets:300   GUUACUCAACCCCCUGGUCGAGU   322 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   ===||||*|||||||||||||*| targets:300   GUUACUCAACCCCCUGGUCGAGU   322 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   UGGUGAGCUGGGGGACCAGCUAA   1   |==||*|||||||||||||||*| targets:582   AUUACYCGACCCCCUGGUCGAGU   604 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget