ncRNA ID | novel_gar_miR1818 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr9:49402546-49402619 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 54 - UGAUUGAGUCGUGCCAAUAUC - 74 |
Stem-loop(if miRNA) |
--          GA          C   UCU     U   UGUUGGCACG  UCAAUCGGAU AAA   CUCAG G   ||||||||||  |||||||||| |||   |||||   AUAACCGUGC  AGUUAGUCUA UUU   GAGUC G CU          UG          A   CCU     A |
Stem-loop sequence | UGUUGGCACGGAUCAAUCGGAUCAAAUCUCUCAGUGGACUGAGUCCUUUAAUCUGAUUGAGUCGUGCCAAUAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017770913.1 |
|
2.5 | PREDICTED: Gossypium arboreum adenylate kinase isoenzyme 6 homolog (LOC108469850), mRNA | adenylate kinase isoenzyme 6 homolog(LOC108469850) | coding protein | psRNATarget |