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BaseInfo

ncRNA ID novel_gar_miR1818
Species Gossypium arboreum
Class miRNA
Genome position Chr9:49402546-49402619 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 21
Mature sequence(if miRNA) 54 - UGAUUGAGUCGUGCCAAUAUC - 74
Stem-loop(if miRNA) --          GA          C   UCU     U
  UGUUGGCACG  UCAAUCGGAU AAA   CUCAG G
  ||||||||||  |||||||||| |||   |||||
  AUAACCGUGC  AGUUAGUCUA UUU   GAGUC G
CU          UG          A   CCU     A
Stem-loop sequence UGUUGGCACGGAUCAAUCGGAUCAAAUCUCUCAGUGGACUGAGUCCUUUAAUCUGAUUGAGUCGUGCCAAUAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017770913.1
ncRNA:21   CUAUAACCGUGCUGAGUUAGU   1
  ||||||*||||||||||=|||
targets:70   GAUAUUUGCACGACUCAGUCA   90

2.5 PREDICTED: Gossypium arboreum adenylate kinase isoenzyme 6 homolog (LOC108469850), mRNA adenylate kinase isoenzyme 6 homolog(LOC108469850) coding protein psRNATarget