ncRNA ID | novel_gar_miR1816 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:120044619-120044827 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 186 - UGUGCCCCAAGGUGAUGUACUCGG - 209 |
Stem-loop(if miRNA) |
--              A              U           A                                ACA  CA  U    A      CAAU  AAA   GAGUACAUCACCUU GGGCGCACCUGUCU AUUUGUGAAAA GAAAGAUGGUUCGUUGCGAUUGUGUAUUGAUU   GG  GU GAAC AGGUAA    UA   A   |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||   ||  || |||| ||||||    ||   CUCAUGUAGUGGAA CCCGUGUGGACAGA UAAACACUUUU CUUUCUACCAAGCAACGCUAACACAUAACUAA   CU  CA CUUG UCCAUU    AU   U GG              C              C           -                                -CG  AA  -    C      ACCU  AAA |
Stem-loop sequence | GAGUACAUCACCUUAGGGCGCACCUGUCUUAUUUGUGAAAAAGAAAGAUGGUUCGUUGCGAUUGUGUAUUGAUUACAGGCAGUUGAACAAGGUAACAAUUAAAAAUAAAUAUCCAUUACCUCGUUCACAAUCGCAAUCAAUACACAAUCGCAACGAACCAUCUUUCUUUUCACAAAUCAGACAGGUGUGCCCCAAGGUGAUGUACUCGG |