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BaseInfo

ncRNA ID novel_gar_miR1798
Species Gossypium arboreum
Class miRNA
Genome position Chr6:110266731-110266847 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - CUACACGGCUUAGAACACGGGCGU - 24
Stem-loop(if miRNA) --          U  AA    G  G     --CUU AU       AUCAUGCACUU     U
  CUACACGGCU AG  CACG GC UGUGU     G  CGUGUGA           AAUUU U
  |||||||||| ||  |||| || |||||     |  |||||||           ||||| U
  GAUGUGCCGA UC  GUGU CG ACACA     C  GCAUACU           UUAAA G
AC          -  -G    G  G     CUCAU CG       ----AUUUAAU     A
Stem-loop sequence CUACACGGCUUAGAACACGGGCGUGUGUCUUGAUCGUGUGAAUCAUGCACUUAAUUUUUUGAAAAUUUAAUUUAUCAUACGGCCUACUCACACAGGCGUGUGGCUAGCCGUGUAGCA