ncRNA ID | novel_gar_miR1798 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:110266731-110266847 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUACACGGCUUAGAACACGGGCGU - 24 |
Stem-loop(if miRNA) |
--          U  AA    G  G     --CUU AU       AUCAUGCACUU     U   CUACACGGCU AG  CACG GC UGUGU     G  CGUGUGA           AAUUU U   |||||||||| ||  |||| || |||||     |  |||||||           ||||| U   GAUGUGCCGA UC  GUGU CG ACACA     C  GCAUACU           UUAAA G AC          -  -G    G  G     CUCAU CG       ----AUUUAAU     A |
Stem-loop sequence | CUACACGGCUUAGAACACGGGCGUGUGUCUUGAUCGUGUGAAUCAUGCACUUAAUUUUUUGAAAAUUUAAUUUAUCAUACGGCCUACUCACACAGGCGUGUGGCUAGCCGUGUAGCA |