ncRNA ID | novel_gar_miR1797 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:29131127-29131211 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAACUCUCUCCCUCAAAGGCU - 21 |
Stem-loop(if miRNA) |
--    U     -      A          -   -UAU    AU   UAAC CUCUC CCUCAA GGCUAUUCUG GUA    GGGU  G   |||| ||||| |||||| |||||||||| |||    ||||   AUUG GAGAG GGAGUU CCGAUGAGGU CAU    CCUA  C AU    C     U      G          U   UGUU    AA |
Stem-loop sequence | UAACUCUCUCCCUCAAAGGCUAUUCUGGUAUAUGGGUAUGCAAAUCCUUGUUACUUGGAGUAGCCGUUGAGGUGAGAGCGUUAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017754868.1 |
|
1.0 | PREDICTED: Gossypium arboreum DELLA protein RGL1-like (LOC108456273), mRNA | DELLA protein RGL1-like(LOC108456273) | coding protein | psRNATarget |