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BaseInfo

ncRNA ID	novel_gar_miR1795
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr11:96081692-96081764 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180721
Length	22
Mature sequence(if miRNA)	1 - CGGCUCGGGGCAUGGACCGACG - 22
Stem-loop(if miRNA)	--   -A G    A   AG     A  -    A   - G   UCG  U AUGC CCC  GUCGA UG UGGA CUG U A   |||  | |||| |||  ||||| || |||| ||| |   AGC  G UACG GGG  CGGCU AC GCCU GAC G G GC   CA G    -   CU     A  U    -   C A
Stem-loop sequence	UCGAUGAUGCACCCAGGUCGAAUGUGGAACUGUGAGAGCCAGUCCGUCAAUCGGCUCGGGGCAUGGACCGACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017753790.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:865   CGUCGGUCCACGCCCCGAGCCG   886 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455200 (LOC108455200), mRNA	uncharacterized LOC108455200(LOC108455200)	coding protein	psRNATarget
XM_017753787.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:1108   CGUCGGUCCACGCCCCGAGCCG   1129 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455194 (LOC108455194), mRNA	uncharacterized LOC108455194(LOC108455194)	coding protein	psRNATarget
XM_017774814.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:1084   CGUCGGUCCACGCCCCGAGCCG   1105 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108473314 (LOC108473314), mRNA	uncharacterized LOC108473314(LOC108473314)	coding protein	psRNATarget
XM_017753782.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:1108   CGUCGGUCCACGCCCCGAGCCG   1129 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455185 (LOC108455185), mRNA	uncharacterized LOC108455185(LOC108455185)	coding protein	psRNATarget
XM_017753778.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:811   CGUCGGUCCACGCCCCGAGCCG   832 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455181 (LOC108455181), mRNA	uncharacterized LOC108455181(LOC108455181)	coding protein	psRNATarget
XM_017753783.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:574   CGUCGGUCCACGCCCCGAGCCG   595 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455188 (LOC108455188), mRNA	uncharacterized LOC108455188(LOC108455188)	coding protein	psRNATarget
XM_017754182.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:340   CGUCGGUCCACGCCCCGAGCCG   361 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455642 (LOC108455642), mRNA	uncharacterized LOC108455642(LOC108455642)	coding protein	psRNATarget
XM_017753786.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:292   CGUCGGUCCACGCCCCGAGCCG   313 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108455193 (LOC108455193), mRNA	uncharacterized LOC108455193(LOC108455193)	coding protein	psRNATarget
XM_017774865.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||||*||||||||||| targets:184   CGUCGGUCCACGCCCCGAGCCG   205 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum uncharacterized LOC108473353 (LOC108473353), mRNA	uncharacterized LOC108473353(LOC108473353)	coding protein	psRNATarget
XM_017755197.1	ncRNA:22   GCAGCCAGGUACGGGGCUCGGC   1   ||||||||=|||||||||||=| targets:80   CGUCGGUCUAUGCCCCGAGCUG   101 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum protein TAR1-like (LOC108456634), mRNA	protein TAR1-like(LOC108456634)	coding protein	psRNATarget