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BaseInfo

ncRNA ID	novel_gar_miR1792
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr5:58440947-58441092 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180721
Length	24
Mature sequence(if miRNA)	123 - AAACUCAUUUGGACUGCCACGUAG - 146
Stem-loop(if miRNA)	--                        A  AU              AGU   UA  A   AAA      UUU    A   AUGUGGCAGUCCAAAUGGGUUUUA AU  CAACUUGGAUGUCU   UAC  GG UGA   UAAGUU   AAUU A   |||||||||||||||||||||||| ||  ||||||||||||||   |||  || |||   ||||||   |||| A   UGCACCGUCAGGUUUACUCAAAAU UA  GUUGAACCUACAGG   AUG  CC AUU   GUUUAA   UUAA U GA                        A  CG              ---   CA  -   -AG      --U    A
Stem-loop sequence	AUGUGGCAGUCCAAAUGGGUUUUAAAUAUCAACUUGGAUGUCUAGUUACUAGGAUGAAAAUAAGUUUUUAAUUAAAUAAAUUUAAUUUGGAUUACCACGUAGGACAUCCAAGUUGGCAUAUAAAACUCAUUUGGACUGCCACGUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017753110.1	ncRNA:24   GAUGCACCGUCAGGUUUACUCAAA   1   =||=*|||||*||||||||||||| targets:1631   UUAUAUGGCAAUCCAAAUGAGUUU   1654 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X7, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753109.1	ncRNA:24   GAUGCACCGUCAGGUUUACUCAAA   1   =||=*|||||*||||||||||||| targets:1634   UUAUAUGGCAAUCCAAAUGAGUUU   1657 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X6, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753105.1	ncRNA:24   GAUGCACCGUCAGGUUUACUCAAA   1   =||=*|||||*||||||||||||| targets:1664   UUAUAUGGCAAUCCAAAUGAGUUU   1687 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X3, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753107.1	ncRNA:24   GAUGCACCGUCAGGUUUACUCAAA   1   =||=*|||||*||||||||||||| targets:1721   UUAUAUGGCAAUCCAAAUGAGUUU   1744 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X4, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753108.1	ncRNA:24   GAUGCACCGUCAGGUUUACUCAAA   1   =||=*|||||*||||||||||||| targets:1739   UUAUAUGGCAAUCCAAAUGAGUUU   1762 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X5, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753103.1	ncRNA:24   GAUGCACCGUCAGGUUUACUCAAA   1   =||=*|||||*||||||||||||| targets:1769   UUAUAUGGCAAUCCAAAUGAGUUU   1792 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X1, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget
XM_017753104.1	ncRNA:24   GAUGCACCGUCAGGUUUACUCAAA   1   =||=*|||||*||||||||||||| targets:1824   UUAUAUGGCAAUCCAAAUGAGUUU   1847 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum A-kinase anchor protein 7-like (LOC108454597), transcript variant X2, mRNA	A-kinase anchor protein 7-like(LOC108454597)	coding protein	psRNATarget