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BaseInfo

ncRNA ID	novel_gar_miR1790
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr5:35250314-35250463 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180721
Length	21
Mature sequence(if miRNA)	1 - UGGGACAAAAAACGCUUUUGA - 21
Stem-loop(if miRNA)	--           A          --      --------UAAAA      GCUUUUGGAAAAGCGCUUUUGGGACAAUU   UGGGACAAAAA CGCUUUUGAG  GAAAGC             UUUUCU                             U   ||||||||||| ||||||||||  ||||||             ||||||   ACCCUGUUUUU GUGAAAAUUC  UUUUCG             UGCGAA                             U AA           C          UA      UAAGGAUUUGUUC      AAUUCUCUUUUUCAAGAAAAGUUUUCGGG
Stem-loop sequence	UGGGACAAAAAACGCUUUUGAGGAAAGCUAAAAUUUUCUGCUUUUGGAAAAGCGCUUUUGGGACAAUUUUGGGCUUUUGAAAAGAACUUUUUCUCUUAAAAGCGUCUUGUUUAGGAAUGCUUUUAUCUUAAAAGUGCUUUUUGUCCCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017778025.1	ncRNA:21   AGUUUUCGCAAAAAACAGGGU   1   |=|||||=|*||||||||||| targets:2385   UUAAAAGUGCUUUUUGUCCCA   2405 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108475991 (LOC108475991), transcript variant X3, mRNA	uncharacterized LOC108475991(LOC108475991)	coding protein	psRNATarget
XM_017793360.1	ncRNA:21   AGUUUUCGCAAAAAACAGGGU   1   **||*|||*|||||||||||| targets:1132   GGAACAGCUUUUUUUGUCCCA   1152 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 (LOC108489085), mRNA	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130(LOC108489085)	coding protein	psRNATarget