| ncRNA ID | novel_gar_miR1789 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr5:31118620-31118711 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180721 |
| Length | 21 |
| Mature sequence(if miRNA) | 72 - UGACAUGGCAAAAAUGCUCCC - 92 |
| Stem-loop(if miRNA) |
-- U CA --AAG UG A A UG GAGCGUUUUU CCA UCAGCA UG UCU UG AGGCG A |||||||||| ||| |||||| || ||| || ||||| CUCGUAAAAA GGU AGUCGU GC GGA GU UCUGU G CC C AC GUUUA GU A A GU |
| Stem-loop sequence | GAGCGUUUUUUCCACAUCAGCAAAGUGUGUCUAUGAAGGCGUGAGUGUGUCUAUGAAGGUGCGAUUUGUGCUGACAUGGCAAAAAUGCUCCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017776740.1 |
|
2.5 | PREDICTED: Gossypium arboreum bifunctional phosphatase IMPL2, chloroplastic (LOC108474730), mRNA | bifunctional phosphatase IMPL2, chloroplastic(LOC108474730) | coding protein | psRNATarget |