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BaseInfo

ncRNA ID ath-miRf11119-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AUACUCGACCACCAGGUCGUGUG - NA
Stem-loop(if miRNA)      AC           CCA     U   - A  CA  A  ----     C -   CCCAGGUCAAGUGACUUUGGAGCCAUUCU
CGAAG  AUACUCGACCA   GGUCG GUG C UC  GC CC    AUACU G ACC                             U
|||||  |||||||||||   ||||| ||| | ||  || ||    ||||| | |||
GCUUC  UAUGAGCUGGU   CCAGC CAC G AG  AG CU    GGACU G CUC                             C
     AC           CCC     U   C C  -U  -  CACC     C A   CUAUGAGCUAGUCCCCCAGCUCAUCUACC
Stem-loop sequence CGAAGACAUACUCGACCACCAGGUCGUGUGCAUCCAGCACCAUACUCGACCCCCAGGUCAAGUGACUUUGGAGCCAUUCUUCCCAUCUACUCGACCCCCUGAUCGAGUAUCCUCAGCUCAGGCCACUCGAUGACGCCACUCGACCCCCUGGUCGAGUAUCACUUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:23   GUGUGCUGGACCACCAGCUCAUA   1
  =||*|||*||*||||||||||||
targets:579   UACUCGAGCUCGUGGUCGAGUAU   601

2.5 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget