ncRNA ID | ath-miRf11119-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - AUACUCGACCACCAGGUCGUGUG - NA |
Stem-loop(if miRNA) |
     AC           CCA     U   - A  CA  A  ----     C -   CCCAGGUCAAGUGACUUUGGAGCCAUUCU CGAAG  AUACUCGACCA   GGUCG GUG C UC  GC CC    AUACU G ACC                             U |||||  |||||||||||   ||||| ||| | ||  || ||    ||||| | ||| GCUUC  UAUGAGCUGGU   CCAGC CAC G AG  AG CU    GGACU G CUC                             C      AC           CCC     U   C C  -U  -  CACC     C A   CUAUGAGCUAGUCCCCCAGCUCAUCUACC |
Stem-loop sequence | CGAAGACAUACUCGACCACCAGGUCGUGUGCAUCCAGCACCAUACUCGACCCCCAGGUCAAGUGACUUUGGAGCCAUUCUUCCCAUCUACUCGACCCCCUGAUCGAGUAUCCUCAGCUCAGGCCACUCGAUGACGCCACUCGACCCCCUGGUCGAGUAUCACUUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183311.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence | NA | coding protein | psRNATarget |