ncRNA ID | novel_gar_miR1781 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:41502789-41502885 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 19 |
Mature sequence(if miRNA) | 79 - AAGUCAUUUUUCAGAAAAG - 97 |
Stem-loop(if miRNA) |
--UAAA                 GUCAACGGAAAA           UU       UGAAAAAUGACUUAUAU            UAAGUCAUUUU  U       |||||||||||||||||            |||||||||||  U       ACUUUUUACUGAAUAUG            AUUCAGUAAAA  U GAAAAG                 AAAAAUUUUCUC           UG |
Stem-loop sequence | UAAAUGAAAAAUGACUUAUAUGUCAACGGAAAAUAAGUCAUUUUUUUUUGUAAAAUGACUUACUCUUUUAAAAAGUAUAAGUCAUUUUUCAGAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768371.1 |
|
3.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108467654 (LOC108467654), mRNA | uncharacterized LOC108467654(LOC108467654) | coding protein | psRNATarget |