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BaseInfo

ncRNA ID novel_gar_miR1780
Species Gossypium arboreum
Class miRNA
Genome position Chr4:23286459-23286549 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 24
Mature sequence(if miRNA) 1 - UUUAACGCAGGAGAACUACUCAAU - 24
Stem-loop(if miRNA) --      --      G   U   CA    AA        -AG   AA
  UUUAAC  GCAGGA AAC ACU  AUCG  UCAAAUAG   AAU  A
  ||||||  |||||| ||| |||  ||||  ||||||||   |||
  AAAUUG  UGUUUU UUG UGA  UAGU  AGUUUAUC   UUA  A
UC      UU      G   -   -A    AA        GAG   AU
Stem-loop sequence UUUAACGCAGGAGAACUACUCAAUCGAAUCAAAUAGAGAAUAAAAUAAUUGAGCUAUUUGAAAUGAUAAGUGUUGUUUUGUUUGUUAAACU