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BaseInfo

ncRNA ID novel_gar_miR1779
Species Gossypium arboreum
Class miRNA
Genome position Chr4:123258697-123258745 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 24
Mature sequence(if miRNA) 26 - AAUACUCUGUAACCCUGUUCCGGC - 49
Stem-loop(if miRNA) --        G     CUGU    G
  AAUACUCU UAACC    UCCG C
  |||||||| |||||    ||||
  UUGUGGGA AUUGG    AGGU G
CA        -     AAAU    A
Stem-loop sequence AAUACUCUGUAACCCUGUUCCGGCGAUGGAUAAAGGUUAAGGGUGUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017761879.1
ncRNA:24   CGGCCUUGUCCCAAUGUCUCAUAA   1
  *|=*|||=||||||||||||||||
targets:1835   ACUAGAAUAGGGUUACAGAGUAUU   1858

1.0 PREDICTED: Gossypium arboreum cytochrome P450 CYP749A22-like (LOC108461902), mRNA cytochrome P450 CYP749A22-like(LOC108461902) coding protein psRNATarget