ncRNA ID | novel_gar_miR1775 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:116587712-116587799 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUUGAACUUGGCAAAUGUA - 21 |
Stem-loop(if miRNA) |
--               A      A        -   AUUUUCA G   UUUUUGAACUUGGCA AUGUAA AGUUUGGU GUG       G U   ||||||||||||||| |||||| |||||||| |||       |   AGAAGCUUGAACUGU UACAUU UCAAAUUA UAC       C G UC               C      G        A   ---GGUG A |
Stem-loop sequence | UUUUUGAACUUGGCAAAUGUAAAAGUUUGGUGUGAUUUUCAGGUGACGUGGCAUAAUUAAACUGUUACAUCUGUCAAGUUCGAAGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017776154.1 |
|
2.5 | PREDICTED: Gossypium arboreum DNA replication licensing factor MCM7 (LOC108474221), mRNA | DNA replication licensing factor MCM7(LOC108474221) | coding protein | psRNATarget | |||||||||
XM_017789575.1 |
|
2.5 | PREDICTED: Gossypium arboreum LOB domain-containing protein 1-like (LOC108485730), mRNA | LOB domain-containing protein 1-like(LOC108485730) | coding protein | psRNATarget |