ncRNA ID | novel_gar_miR1774 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:71550737-71550808 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 52 - UGACAUGGCAAAAAUGCUCCC - 72 |
Stem-loop(if miRNA) |
--           A  CA   A     UA   -  A   GAGUGUUUUUG CA  UCA CAAAA  CGU CC U   ||||||||||| ||  ||| |||||  ||| || G   CUCGUAAAAAC GU  AGU GUUUU  GCG GG A CC           G  AC   C     UA   U  G |
Stem-loop sequence | GAGUGUUUUUGACACAUCAACAAAAUACGUCCAUGAGGGUGCGAUUUUUGCUGACAUGGCAAAAAUGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017776740.1 |
|
2.5 | PREDICTED: Gossypium arboreum bifunctional phosphatase IMPL2, chloroplastic (LOC108474730), mRNA | bifunctional phosphatase IMPL2, chloroplastic(LOC108474730) | coding protein | psRNATarget |