ncRNA ID | ath-miRf11118-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - ACUCGACCACCUGGUCGUGUG - NA |
Stem-loop(if miRNA) |
    AC           CCU     U   ----    C  CACC  ACUCGACCCCCAGGUCGAGUGACUUUGGAGCCAUUCUU GAAG  AUACUCGACCA   GGUCG GUG    CAUC AG    AU                                      C ||||  |||||||||||   ||||| |||    |||| ||    || CUUC  UAUGAGCUGGU   CCAGC CAC    GUAG UC    CG                                      C     AC           CCC     U   CGCA    C  --AC  GACUCGACUCCUAUGAGCUGGUCCCCCAGCUCAUCUAC |
Stem-loop sequence | GAAGACAUACUCGACCACCUGGUCGUGUGCAUCCAGCACCAUACUCGACCCCCAGGUCGAGUGACUUUGGAGCCAUUCUUCCCAUCUACUCGACCCCCUGGUCGAGUAUCCUCAGCUCAGGCCACUCGAUGACGCCACUCGACCCCCUGGUCGAGUAUCACUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183311.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence | NA | coding protein | psRNATarget |