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BaseInfo

ncRNA ID ath-miRf11118-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - ACUCGACCACCUGGUCGUGUG - NA
Stem-loop(if miRNA)     AC           CCU     U   ----    C  CACC  ACUCGACCCCCAGGUCGAGUGACUUUGGAGCCAUUCUU
GAAG  AUACUCGACCA   GGUCG GUG    CAUC AG    AU                                      C
||||  |||||||||||   ||||| |||    |||| ||    ||
CUUC  UAUGAGCUGGU   CCAGC CAC    GUAG UC    CG                                      C
    AC           CCC     U   CGCA    C  --AC  GACUCGACUCCUAUGAGCUGGUCCCCCAGCUCAUCUAC
Stem-loop sequence GAAGACAUACUCGACCACCUGGUCGUGUGCAUCCAGCACCAUACUCGACCCCCAGGUCGAGUGACUUUGGAGCCAUUCUUCCCAUCUACUCGACCCCCUGGUCGAGUAUCCUCAGCUCAGGCCACUCGAUGACGCCACUCGACCCCCUGGUCGAGUAUCACUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:21   GUGUGCUGGUCCACCAGCUCA   1
  =||*||||||||*||||||||
targets:436   UACUCGACCAGGGGGUCGAGU   456

2.5 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget