| ncRNA ID | novel_gar_miR1770 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr3:54476532-54476684 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180721 |
| Length | 21 |
| Mature sequence(if miRNA) | 133 - UCAAAGAGCAAACUGGUCAUU - 153 |
| Stem-loop(if miRNA) |
-- C CUG C C C C ------------CAA CGUGUCACAUGU UCAAAGAG AAA GUCAUUU UG UAAAA UUUCAU CAUUUCUAUUA GUGA A |||||||| ||| ||||||| || ||||| |||||| ||||||||||| |||| AGUUUCUC UUU CAGUAGA AC AUUUU AAAGUA GUGAAGAUGAU ACAU C UU A AAA - A U A AAUUUUUGACCAAGA GCAGCCGUACUU |
| Stem-loop sequence | UCAAAGAGCAAACUGGUCAUUUCUGCUAAAACUUUCAUCCAUUUCUAUUACAAGUGACGUGUCACAUGUACUUCAUGCCGACGUACAAGAACCAGUUUUUAAUAGUAGAAGUGAAUGAAAUUUUUAACAAGAUGACAAAUUUACUCUUUGAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017771863.1 |
|
1.0 | PREDICTED: Gossypium arboreum proteasome subunit beta type-4-like (LOC108470518), mRNA | proteasome subunit beta type-4-like(LOC108470518) | coding protein | psRNATarget | |||||||||
| XM_017794441.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108489730 (LOC108489730), mRNA | uncharacterized LOC108489730(LOC108489730) | coding protein | psRNATarget |