ncRNA ID | novel_gar_miR1768 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:95315909-95315965 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UAUGGGGUCACAUUUUUCGGUU - 22 |
Stem-loop(if miRNA) |
--UAUG    C       U     A   G       GGGU ACAUUUU CGGUU GUU U       |||| ||||||| ||||| |||       UUUA UGUAAGA GCCAA UAA A UUCUGA    A       -     G   A |
Stem-loop sequence | UAUGGGGUCACAUUUUUCGGUUAGUUGUAAAAUGAACCGAGAAUGUAAUUUAGUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017792084.1 |
|
1.0 | PREDICTED: Gossypium arboreum uncharacterized LOC108487715 (LOC108487715), mRNA | uncharacterized LOC108487715(LOC108487715) | coding protein | psRNATarget | |||||||||
XM_017762695.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108462793 (LOC108462793), partial mRNA | uncharacterized LOC108462793(LOC108462793) | coding protein | psRNATarget |