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BaseInfo

ncRNA ID novel_gar_miR1767
Species Gossypium arboreum
Class miRNA
Genome position Chr2:67084944-67085025 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 21
Mature sequence(if miRNA) 62 - UUGGUGGGGAGAUGCUUCUAA - 82
Stem-loop(if miRNA) -A           G        C               AG
  GGAAGUGUCUC CCACCAAG AAAUGUUUAGUAUUU  C
  ||||||||||| |||||||| |||||||||||||||  C
  UCUUCGUAGAG GGUGGUUC UUUACAAGUCGUAAA  G
AA           G        C               CC
Stem-loop sequence AGGAAGUGUCUCGCCACCAAGCAAAUGUUUAGUAUUUAGCCGCCAAAUGCUGAACAUUUCCUUGGUGGGGAGAUGCUUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017753757.1
ncRNA:21   AAUCUUCGUAGAGGGGUGGUU   1
  **|||||||||||*|||||||
targets:42   AGAGAAGCAUCUCACCACCAA   62

1.5 PREDICTED: Gossypium arboreum protein NRT1/ PTR FAMILY 1.1-like (LOC108455157), mRNA protein NRT1/ PTR FAMILY 1.1-like(LOC108455157) coding protein psRNATarget