ncRNA ID | novel_gar_miR1767 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:67084944-67085025 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 62 - UUGGUGGGGAGAUGCUUCUAA - 82 |
Stem-loop(if miRNA) |
-A           G        C               AG   GGAAGUGUCUC CCACCAAG AAAUGUUUAGUAUUU  C   ||||||||||| |||||||| |||||||||||||||  C   UCUUCGUAGAG GGUGGUUC UUUACAAGUCGUAAA  G AA           G        C               CC |
Stem-loop sequence | AGGAAGUGUCUCGCCACCAAGCAAAUGUUUAGUAUUUAGCCGCCAAAUGCUGAACAUUUCCUUGGUGGGGAGAUGCUUCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017753757.1 |
|
1.5 | PREDICTED: Gossypium arboreum protein NRT1/ PTR FAMILY 1.1-like (LOC108455157), mRNA | protein NRT1/ PTR FAMILY 1.1-like(LOC108455157) | coding protein | psRNATarget |