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BaseInfo

ncRNA ID novel_gar_miR1766
Species Gossypium arboreum
Class miRNA
Genome position Chr2:60689672-60689723 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 22
Mature sequence(if miRNA) 31 - UAAGGGCAUUCGAUGGGACAAU - 52
Stem-loop(if miRNA) --         U  G     GUCAUU
  UGUCCUAUU AA GCCCU      C
  ||||||||| || |||||
  ACAGGGUAG UU CGGGA      C
UA         C  A     AUGGCA
Stem-loop sequence UGUCCUAUUUAAGGCCCUGUCAUUCCACGGUAAGGGCAUUCGAUGGGACAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017783198.1
ncRNA:22   UAACAGGGUAGCUUACGGGAAU   1
  **|||*|||||||||||||||=
targets:341   UCUGUGCCAUCGAAUGCCCUUG   362

2.0 PREDICTED: Gossypium arboreum protein pleiotropic regulatory locus 1 (LOC108480269), mRNA protein pleiotropic regulatory locus 1(LOC108480269) coding protein psRNATarget