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BaseInfo

ncRNA ID	novel_gar_miR1765
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr2:32275037-32275127 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180721
Length	21
Mature sequence(if miRNA)	1 - CAUUCUGUCCACCUCCAUUGA - 21
Stem-loop(if miRNA)	--   U   U  A       UGAUG      UUCUUACCUACCCAACU   CAU CUG CC CCUCCAU     UACUUC                 U   ||| ||| || |||||||     ||||||   GUA GAC GG GGAGGUA     AUGAAG                 A CU   U   C  C       -----      UUUCUGUUUAGUAAAAU
Stem-loop sequence	CAUUCUGUCCACCUCCAUUGAUGUACUUCUUCUUACCUACCCAACUUAUAAAAUGAUUUGUCUUUGAAGUAAUGGAGGCGGCCAGUAUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017767937.1	ncRNA:21   AGUUACCUCCACCUGUCUUAC   1   |*=|*|||||||||||||||| targets:1306   UGGAAGGAGGUGGACAGAAUG   1326 Target Full Sequence	2.0	PREDICTED: Gossypium arboreum F-box only protein 6 (LOC108467312), mRNA	F-box only protein 6(LOC108467312)	coding protein	psRNATarget
XM_017747744.1	ncRNA:21   AGUUACCUCCACCUGUCUUAC   1   ||||||||||||||*|||||* targets:514   UCAAUGGAGGUGGAAAGAAUC   534 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum uncharacterized LOC108450220 (LOC108450220), mRNA	uncharacterized LOC108450220(LOC108450220)	coding protein	psRNATarget
XM_017787197.1	ncRNA:21   AGUUACCUCCACCUGUCUUAC   1   *=|||||||||||*||||||* targets:2030   GUAAUGGAGGUGGCCAGAAUA   2050 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum DExH-box ATP-dependent RNA helicase DExH11 (LOC108483671), transcript variant X3, mRNA	DExH-box ATP-dependent RNA helicase DExH11(LOC108483671)	coding protein	psRNATarget
XM_017787196.1	ncRNA:21   AGUUACCUCCACCUGUCUUAC   1   *=|||||||||||*||||||* targets:2042   GUAAUGGAGGUGGCCAGAAUA   2062 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum DExH-box ATP-dependent RNA helicase DExH11 (LOC108483671), transcript variant X2, mRNA	DExH-box ATP-dependent RNA helicase DExH11(LOC108483671)	coding protein	psRNATarget
XM_017787195.1	ncRNA:21   AGUUACCUCCACCUGUCUUAC   1   *=|||||||||||*||||||* targets:2045   GUAAUGGAGGUGGCCAGAAUA   2065 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum DExH-box ATP-dependent RNA helicase DExH11 (LOC108483671), transcript variant X1, mRNA	DExH-box ATP-dependent RNA helicase DExH11(LOC108483671)	coding protein	psRNATarget