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BaseInfo

ncRNA ID	ath-miRf11117-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GCUUGUGGCUGCAACGUAUCG - NA
Stem-loop(if miRNA)	ACU C            C     GU     UC    UGU AGAACA   G UUGUGGCUGCAA GUAUC  GUCUG  AUUG   A ||||||   | |||||||||||| |||||  |||||  |||| UCUUGU   C AACACCGACGUU CAUAG  UAGAU  UGAU   A       -AU U            U     --     CU    UUG
Stem-loop sequence	AGAACAACUGCUUGUGGCUGCAACGUAUCGUGUCUGUCAUUGUGUAAGUUUAGUUCUAGAUGAUACUUUGCAGCCACAAUCUAUGUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY096602.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:339   CAAUACGAUGCAGCCACAAGC   359 Target Full Sequence	1.0	Arabidopsis thaliana putative proline-rich protein precursor (At1g73840) mRNA, complete cds	NA	coding protein	psRNATarget
BX814236.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:351   CAAUACGAUGCAGCCACAAGC   371 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX816121.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:322   CAAUACGAUGCAGCCACAAGC   342 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZG01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX813884.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:349   CAAUACGAUGCAGCCACAAGC   369 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX814354.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:350   CAAUACGAUGCAGCCACAAGC   370 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX814183.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:360   CAAUACGAUGCAGCCACAAGC   380 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX816445.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:359   CAAUACGAUGCAGCCACAAGC   379 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY070424.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:375   CAAUACGAUGCAGCCACAAGC   395 Target Full Sequence	1.0	Arabidopsis thaliana putative proline-rich protein precursor (At1g73840) mRNA, complete cds	NA	coding protein	psRNATarget
NM_106044.6	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:383   CAAUACGAUGCAGCCACAAGC   403 Target Full Sequence	1.0	Arabidopsis thaliana hydroxyproline-rich glycoprotein family protein (ESP1), mRNA	hydroxyproline-rich glycoprotein family protein(ESP1)	coding protein	psRNATarget
NM_001334607.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   |*|||||*||||||||||||| targets:527   CAAUACGAUGCAGCCACAAGC   547 Target Full Sequence	1.0	Arabidopsis thaliana hydroxyproline-rich glycoprotein family protein (ESP1), mRNA	hydroxyproline-rich glycoprotein family protein(ESP1)	coding protein	psRNATarget
BX813580.1	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   **|||||*||||||||||||| targets:350   AAAUACGAUGCAGCCACAAGC   370 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB25ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_114994.3	ncRNA:21   GCUAUGCAACGUCGGUGUUCG   1   **||*|||||||||*|||||| targets:781   GCAUUCGUUGCAGCGACAAGC   801 Target Full Sequence	2.5	Arabidopsis thaliana Eukaryotic aspartyl protease family protein mRNA	Eukaryotic aspartyl protease family protein(AT3G51350)	coding protein	psRNATarget