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BaseInfo

ncRNA ID novel_gar_miR1754
Species Gossypium arboreum
Class miRNA
Genome position Chr13:11657287-11657472 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 24
Mature sequence(if miRNA) 1 - AUAAGGAUGACGUGGAAUCACAGU - 24
Stem-loop(if miRNA) --UA         A            U         UA    C  C    C        -C     -AA       C   CCUU    AAAAAA
    UGAUUCCAC UCAUCCUUAUCC UUUCCAAUA  AGAA GA AAAU AGAUUUUU  CUCCU   UUUUAGU UUU    GUUG      A
    ||||||||| |||||||||||| |||||||||  |||| || |||| ||||||||  |||||   ||||||| |||    ||||      U
    ACUAAGGUG AGUAGGAAUAGG AAAGGUUAU  UCUU CU UUUA UCUAAAAA  GAGGA   AAAAUCG AAA    CAAC      U
UGAC         C            C         CC    A  U    A        AA     CUA       U   -AAU    CUAAAC
Stem-loop sequence UAUGAUUCCACAUCAUCCUUAUCCUUUUCCAAUAUAAGAACGACAAAUCAGAUUUUUCCUCCUAAUUUUAGUCUUUCCUUGUUGAAAAAAAUUCAAAUCCAACUAAAAAUGCUAAAAAUCAGGAGAAAAAAAUCUAAUUUUUCAUUCUCCUAUUGGAAACGGAUAAGGAUGACGUGGAAUCACAGU