ncRNA ID | novel_gar_miR1754 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:11657287-11657472 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAAGGAUGACGUGGAAUCACAGU - 24 |
Stem-loop(if miRNA) |
--UA         A            U         UA    C  C    C        -C     -AA       C   CCUU    AAAAAA     UGAUUCCAC UCAUCCUUAUCC UUUCCAAUA  AGAA GA AAAU AGAUUUUU  CUCCU   UUUUAGU UUU    GUUG      A     ||||||||| |||||||||||| |||||||||  |||| || |||| ||||||||  |||||   ||||||| |||    ||||      U     ACUAAGGUG AGUAGGAAUAGG AAAGGUUAU  UCUU CU UUUA UCUAAAAA  GAGGA   AAAAUCG AAA    CAAC      U UGAC         C            C         CC    A  U    A        AA     CUA       U   -AAU    CUAAAC |
Stem-loop sequence | UAUGAUUCCACAUCAUCCUUAUCCUUUUCCAAUAUAAGAACGACAAAUCAGAUUUUUCCUCCUAAUUUUAGUCUUUCCUUGUUGAAAAAAAUUCAAAUCCAACUAAAAAUGCUAAAAAUCAGGAGAAAAAAAUCUAAUUUUUCAUUCUCCUAUUGGAAACGGAUAAGGAUGACGUGGAAUCACAGU |