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BaseInfo

ncRNA ID novel_gar_miR1753
Species Gossypium arboreum
Class miRNA
Genome position Chr5:42605535-42605754 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - UUCUUGCUGCUAUUGCUUGCUGGA - 24
Stem-loop(if miRNA) --                                 UA                      C                                        --CUAGAA  G
  CAGCAAGCAAUAGCAGUAAGAAUUAAACUAAGU  UGAACAUCGAUACAUUGUAGGA AGGCUUGAUCAAGAGCAUUAGCCAAACAAUAGCAGCAAAC        UC A
  |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||
  GUCGUUCGUUAUCGUCGUUCUUAAUUUGAUUCA  ACUUGUAGCUAUGUAACAUCCU UCCGAACUGGUUCUCGUAAUCGGUUUGUUAUCGUCGUUUG        GG G
AG                                 UA                      A                                        UACCCAGA  A
Stem-loop sequence CAGCAAGCAAUAGCAGUAAGAAUUAAACUAAGUUAUGAACAUCGAUACAUUGUAGGACAGGCUUGAUCAAGAGCAUUAGCCAAACAAUAGCAGCAAACCUAGAAUCGAGAGGAGACCCAUGUUUGCUGCUAUUGUUUGGCUAAUGCUCUUGGUCAAGCCUAUCCUACAAUGUAUCGAUGUUCAAUACUUAGUUUAAUUCUUGCUGCUAUUGCUUGCUGGA