ncRNA ID | novel_gar_miR1753 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:42605535-42605754 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCUUGCUGCUAUUGCUUGCUGGA - 24 |
Stem-loop(if miRNA) |
--                                 UA                      C                                        --CUAGAA  G   CAGCAAGCAAUAGCAGUAAGAAUUAAACUAAGU  UGAACAUCGAUACAUUGUAGGA AGGCUUGAUCAAGAGCAUUAGCCAAACAAUAGCAGCAAAC        UC A   |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||   GUCGUUCGUUAUCGUCGUUCUUAAUUUGAUUCA  ACUUGUAGCUAUGUAACAUCCU UCCGAACUGGUUCUCGUAAUCGGUUUGUUAUCGUCGUUUG        GG G AG                                 UA                      A                                        UACCCAGA  A |
Stem-loop sequence | CAGCAAGCAAUAGCAGUAAGAAUUAAACUAAGUUAUGAACAUCGAUACAUUGUAGGACAGGCUUGAUCAAGAGCAUUAGCCAAACAAUAGCAGCAAACCUAGAAUCGAGAGGAGACCCAUGUUUGCUGCUAUUGUUUGGCUAAUGCUCUUGGUCAAGCCUAUCCUACAAUGUAUCGAUGUUCAAUACUUAGUUUAAUUCUUGCUGCUAUUGCUUGCUGGA |