ncRNA ID | novel_gar_miR1750 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:22639826-22639901 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 56 - CGAGCCGAAUCAAUAUCACUC - 76 |
Stem-loop(if miRNA) |
--         C   U    AU   ----     UCUGUA   GUGAUAUUG UUC GCUC  CUU    CUUUC      A   ||||||||| ||| ||||  |||    |||||   CACUAUAAC AAG CGAG  GAA    GAAAG      U CU         U   C    CG   CUUU     UCUCCC |
Stem-loop sequence | GUGAUAUUGCUUCUGCUCAUCUUCUUUCUCUGUAAUCCCUCUGAAAGUUUCAAGGCGAGCCGAAUCAAUAUCACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017789517.1 |
|
2.5 | PREDICTED: Gossypium arboreum nodulation-signaling pathway 2 protein-like (LOC108485665), mRNA | nodulation-signaling pathway 2 protein-like(LOC108485665) | coding protein | psRNATarget | |||||||||
XM_017750598.1 |
|
2.5 | PREDICTED: Gossypium arboreum nodulation-signaling pathway 2 protein (LOC108452807), mRNA | nodulation-signaling pathway 2 protein(LOC108452807) | coding protein | psRNATarget |