Search result

BaseInfo

ncRNA ID ath-miRf11115-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGCUCUCUGGCGUAUUCUUC - NA
Stem-loop(if miRNA)        G       -   --U   -  UC    C   -  A  UU A C     AUCU
AUUUCCU CUCUCUG GCG   AUU CU  AGCC AUC UA CG  C C UCGGA    U
||||||| ||||||| |||   ||| ||  |||| ||| || ||  | | |||||
UGAGGGA GAGAGGC CGU   UAA GG  UCGG UAG AU GC  G G AGCCU    C
       G       U   CUC   U  CU    C   U  A  -U C A     AUUA
Stem-loop sequence AUUUCCUGCUCUCUGGCGUAUUCUUCAGCCCAUCUAACGUUCACCUCGGAAUCUUCAUUAUCCGAAGCGUCGAUAUGAUCGGCUUCGGUAAUCUCUGCUCGGAGAGGAGGGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_102842.3
ncRNA:20   CUUCUUAUGCGGUCUCUCGU   1
  ||||||*|*|||||||||||
targets:1018   GAAGAAGAAGCCAGAGAGCA   1037

2.5 Arabidopsis thaliana PLATZ transcription factor family protein mRNA PLATZ transcription factor family protein(AT1G31040) coding protein psRNATarget