ncRNA ID | ath-miRf11115-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UGCUCUCUGGCGUAUUCUUC - NA |
Stem-loop(if miRNA) |
       G       -   --U   -  UC    C   -  A  UU A C     AUCU AUUUCCU CUCUCUG GCG   AUU CU  AGCC AUC UA CG  C C UCGGA    U ||||||| ||||||| |||   ||| ||  |||| ||| || ||  | | ||||| UGAGGGA GAGAGGC CGU   UAA GG  UCGG UAG AU GC  G G AGCCU    C        G       U   CUC   U  CU    C   U  A  -U C A     AUUA |
Stem-loop sequence | AUUUCCUGCUCUCUGGCGUAUUCUUCAGCCCAUCUAACGUUCACCUCGGAAUCUUCAUUAUCCGAAGCGUCGAUAUGAUCGGCUUCGGUAAUCUCUGCUCGGAGAGGAGGGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_102842.3 |
|
2.5 | Arabidopsis thaliana PLATZ transcription factor family protein mRNA | PLATZ transcription factor family protein(AT1G31040) | coding protein | psRNATarget |