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BaseInfo

ncRNA ID novel_gar_miR1739
Species Gossypium arboreum
Class miRNA
Genome position Chr12:25247987-25248040 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 24
Mature sequence(if miRNA) 31 - AAUAUACGGAGGAUCGGAUCAACA - 54
Stem-loop(if miRNA) ---UAU  AAUG     U   G   GAC
      UC    UCUCU GUA GUU   G
      ||    ||||| ||| |||
      AG    GGAGG CAU UAA   U
ACAACU  GCUA     -   A   AAG
Stem-loop sequence UAUUCAAUGUCUCUUGUAGGUUGACGUGAAAAUAUACGGAGGAUCGGAUCAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768860.1
ncRNA:24   ACAACUAGGCUAGGAGGCAUAUAA   1
  ***|||||||||||||||||*||*
targets:777   CUAUGAUCCGAUCCUCCGUAAAUG   800

2.5 PREDICTED: Gossypium arboreum F-box/kelch-repeat protein At3g61590-like (LOC108468011), mRNA F-box/kelch-repeat protein At3g61590-like(LOC108468011) coding protein psRNATarget