ncRNA ID | novel_gar_miR1739 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:25247987-25248040 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 24 |
Mature sequence(if miRNA) | 31 - AAUAUACGGAGGAUCGGAUCAACA - 54 |
Stem-loop(if miRNA) |
---UAU  AAUG     U   G   GAC       UC    UCUCU GUA GUU   G       ||    ||||| ||| |||       AG    GGAGG CAU UAA   U ACAACU  GCUA     -   A   AAG |
Stem-loop sequence | UAUUCAAUGUCUCUUGUAGGUUGACGUGAAAAUAUACGGAGGAUCGGAUCAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017768860.1 |
|
2.5 | PREDICTED: Gossypium arboreum F-box/kelch-repeat protein At3g61590-like (LOC108468011), mRNA | F-box/kelch-repeat protein At3g61590-like(LOC108468011) | coding protein | psRNATarget |