ncRNA ID | ath-miRf11114-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GUGAUGUCCUCUACUCGACC - NA |
Stem-loop(if miRNA) |
    AA  --A  G     -CU          AG          -----------     G GGUG  GU   GU AUGUC   CUACUCGACC  GGGGUCGAGU           GAUCU U ||||  ||   || |||||   ||||||||||  ||||||||||           ||||| UCGC  CG   UA UACAG   GGUGAGCUGG  CUCCAGCUCA           CUAGA U     -C  GAC  G     UUU          GG          UCUUCGAAGUU     G |
Stem-loop sequence | GGUGAAGUAGUGAUGUCCUCUACUCGACCAGGGGGUCGAGUGAUCUGUUGAGAUCUUGAAGCUUCUACUCGACCUCGGGGUCGAGUGGUUUGACAUGAUCAGGCCCGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183042.1 |
|
0.0 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183194.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY227642.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget |