ncRNA ID | novel_gar_miR1727 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:126811500-126811651 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAGGUAGCUGUGUGCCGUGCA - 21 |
Stem-loop(if miRNA) |
--CUU   U        G    C    AGU    AG   ---  AC        G        AAGU     ----    U      GGC CAUGGCUA CUAC AAGG   UGUG  CGU   CC  UGGUAGGG UUGAACCU    UGCCC    AAUG U      ||| |||||||| |||| ||||   ||||  |||   ||  |||||||| ||||||||    |||||    ||||      CCG GUGUCGAU GAUG UUCC   ACAC  GUA   GG  ACUAUCUC AACUUGGG    ACGGG    UUAC G ACGUG   U        G    U    CUU    CU   AAC  AU        G        ---C     GAAU    U |
Stem-loop sequence | CUUGGCUCAUGGCUAGCUACCAAGGAGUUGUGAGCGUCCACUGGUAGGGGUUGAACCUAAGUUGCCCAAUGUUGUCAUUUAAGGGGCACGGGUUCAAGCUCUAUCAUAGGCAAAUGUCCACAUUCCCUUUGUAGGUAGCUGUGUGCCGUGCA |