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BaseInfo

ncRNA ID novel_gar_miR1727
Species Gossypium arboreum
Class miRNA
Genome position Chr1:126811500-126811651 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 21
Mature sequence(if miRNA) 1 - UAGGUAGCUGUGUGCCGUGCA - 21
Stem-loop(if miRNA) --CUU   U        G    C    AGU    AG   ---  AC        G        AAGU     ----    U
     GGC CAUGGCUA CUAC AAGG   UGUG  CGU   CC  UGGUAGGG UUGAACCU    UGCCC    AAUG U
     ||| |||||||| |||| ||||   ||||  |||   ||  |||||||| ||||||||    |||||    ||||
     CCG GUGUCGAU GAUG UUCC   ACAC  GUA   GG  ACUAUCUC AACUUGGG    ACGGG    UUAC G
ACGUG   U        G    U    CUU    CU   AAC  AU        G        ---C     GAAU    U
Stem-loop sequence CUUGGCUCAUGGCUAGCUACCAAGGAGUUGUGAGCGUCCACUGGUAGGGGUUGAACCUAAGUUGCCCAAUGUUGUCAUUUAAGGGGCACGGGUUCAAGCUCUAUCAUAGGCAAAUGUCCACAUUCCCUUUGUAGGUAGCUGUGUGCCGUGCA