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BaseInfo

ncRNA ID ath-miRf11113-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GGCCCAUUCGAAGCCCAUUA - NA
Stem-loop(if miRNA)           --U   A CCC       -----A     
GAUGGCCCAU   CGA G   AUUAGGA      GCCUGC
||||||||||   ||| |   |||||||      |||||U
UUGCCGGGUA   GCU C   UAGUUCU      CGGAUU
          CCU   A -AC       CACAGC     
Stem-loop sequence GAUGGCCCAUUCGAAGCCCAUUAGGAAGCCUGCUUUAGGCCGACACUCUUGAUCACAUCGUCCAUGGGCCGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_147960.1
ncRNA:20   AUUACCCGAAGCUUACCCGG   1
  *|||||||||||||||||||
targets:54   GAAUGGGCUUCGAAUGGGCC   73

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT5G30341) coding protein psRNATarget
NM_001334982.1
ncRNA:20   AUUACCCGAAGCUUACCCGG   1
  *||||||||||*|||||||=
targets:2244   CAAUGGGCUUCCAAUGGGCU   2263

2.5 Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein mRNA P-loop containing nucleoside triphosphate hydrolases superfamily protein(AT1G80380) coding protein psRNATarget