ncRNA ID | novel_gar_miR1715 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:12825838-12826024 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180721 |
Length | 24 |
Mature sequence(if miRNA) | 164 - AUAAGGAUGACGUGGAAUCACAGU - 187 |
Stem-loop(if miRNA) |
--   A       A          -       C     C                                CC   -----UUUUUCCUCC    AA   UGU AUUCCAC UUAUUUUUAU CCUUUUC AAUAG AGAAUGACAAAUCAGAUUUUUCCUCUUGAUUU  AGC               UGAA  C   ||| ||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||  |||               ||||   ACA UAAGGUG AGUAGGAAUA GGAAAAG UUAUC UCUUACUGUUUAGUCUAAAAAGGAGGACUAAA  UCG               ACUU  A UG   C       C          C       -     C                                AA   UAAUAAUCAACCUAA    AA |
Stem-loop sequence | UGUAAUUCCACAUUAUUUUUAUCCUUUUCCAAUAGCAGAAUGACAAAUCAGAUUUUUCCUCUUGAUUUCCAGCUUUUUCCUCCUGAAAACAAAUUCAAAUCCAACUAAUAAUGCUAAAAAUCAGGAGGAAAAAUCUGAUUUGUCAUUCUCCUAUUGAAAAGGCAUAAGGAUGACGUGGAAUCACAGU |