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BaseInfo

ncRNA ID novel_gar_miR1715
Species Gossypium arboreum
Class miRNA
Genome position Chr1:12825838-12826024 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180721
Length 24
Mature sequence(if miRNA) 164 - AUAAGGAUGACGUGGAAUCACAGU - 187
Stem-loop(if miRNA) --   A       A          -       C     C                                CC   -----UUUUUCCUCC    AA
  UGU AUUCCAC UUAUUUUUAU CCUUUUC AAUAG AGAAUGACAAAUCAGAUUUUUCCUCUUGAUUU  AGC               UGAA  C
  ||| ||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||  |||               ||||
  ACA UAAGGUG AGUAGGAAUA GGAAAAG UUAUC UCUUACUGUUUAGUCUAAAAAGGAGGACUAAA  UCG               ACUU  A
UG   C       C          C       -     C                                AA   UAAUAAUCAACCUAA    AA
Stem-loop sequence UGUAAUUCCACAUUAUUUUUAUCCUUUUCCAAUAGCAGAAUGACAAAUCAGAUUUUUCCUCUUGAUUUCCAGCUUUUUCCUCCUGAAAACAAAUUCAAAUCCAACUAAUAAUGCUAAAAAUCAGGAGGAAAAAUCUGAUUUGUCAUUCUCCUAUUGAAAAGGCAUAAGGAUGACGUGGAAUCACAGU