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BaseInfo

ncRNA ID novel_gar_miR1704
Species Gossypium arboreum
Class miRNA
Genome position Chr5:50993224-50993397 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - AUAUUGGGACUUGAACUAGACAGU - 24
Stem-loop(if miRNA) --      --    U  UU    UU   UAUUUUUAAUAUUUUAU       A    UUU  C       --         ----UUAUCAACAACU   AC
  UGUCUG  UCAG GU  CAAU  UGA                 GGAUAAU UAUU   GG UCAAAGG  GGCUUGAAU                CUC  A
  ||||||  |||| ||  ||||  |||                 ||||||| ||||   || |||||||  |||||||||                |||
  ACAGAU  AGUU CA  GUUA  ACU                 CUUAUUA AUGG   UC AGUUUCC  UUGAACUUG                GAG  U
UG      CA    -  GG    -U   -----------------       -    --U  A       GA         UUUUUUUUACAAAUCC   GU
Stem-loop sequence UGUCUGUCAGUGUUUCAAUUUUGAUAUUUUUAAUAUUUUAUGGAUAAUAUAUUUUUGGCUCAAAGGGGCUUGAAUUUAUCAACAACUCUCACAUUGGAGCCUAAACAUUUUUUUUGUUCAAGUUAGCCUUUGAACUUGGUAAUUAUUCUCAUAUUGGGACUUGAACUAGACAGU