ncRNA ID | novel_gar_miR1703 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:52452755-52452837 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 63 - GCAUCAGAGGAGUCAAGCAGG - 83 |
Stem-loop(if miRNA) |
--   C       -   C          U   UGCU     AA   UGC UGGCUCC CUG AUGCCAACUA GGA    GUCAA  A   ||| ||||||| ||| |||||||||| |||    |||||  U   ACG ACUGAGG GAC UACGGUUGAU CCU    CGGUU  G GG   A       A   -          -   -UCC     AG |
Stem-loop sequence | UGCCUGGCUCCCUGCAUGCCAACUAUGGAUGCUGUCAAAAAUGGAUUGGCCCUUCCUAGUUGGCAUCAGAGGAGUCAAGCAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017752773.1 |
|
2.5 | PREDICTED: Gossypium arboreum PTI1-like tyrosine-protein kinase 3 (LOC108454342), mRNA | PTI1-like tyrosine-protein kinase 3(LOC108454342) | coding protein | psRNATarget |