Search result

BaseInfo

ncRNA ID novel_gar_miR1703
Species Gossypium arboreum
Class miRNA
Genome position Chr4:52452755-52452837 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 21
Mature sequence(if miRNA) 63 - GCAUCAGAGGAGUCAAGCAGG - 83
Stem-loop(if miRNA) --   C       -   C          U   UGCU     AA
  UGC UGGCUCC CUG AUGCCAACUA GGA    GUCAA  A
  ||| ||||||| ||| |||||||||| |||    |||||  U
  ACG ACUGAGG GAC UACGGUUGAU CCU    CGGUU  G
GG   A       A   -          -   -UCC     AG
Stem-loop sequence UGCCUGGCUCCCUGCAUGCCAACUAUGGAUGCUGUCAAAAAUGGAUUGGCCCUUCCUAGUUGGCAUCAGAGGAGUCAAGCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017752773.1
ncRNA:21   GGACGAACUGAGGAGACUACG   1
  ***||||||||||||*|||||
targets:619   AAAGCUUGACUCCUCCGAUGC   639

2.5 PREDICTED: Gossypium arboreum PTI1-like tyrosine-protein kinase 3 (LOC108454342), mRNA PTI1-like tyrosine-protein kinase 3(LOC108454342) coding protein psRNATarget