ncRNA ID | novel_gar_miR1694 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:80494171-80494291 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 101 - UACGAGAUUUGGUUCUGAACU - 121 |
Stem-loop(if miRNA) |
-- AG AG -A AGAUU AAA AUU -- GCCGAAAAACAGAU UUCA A AAGUU GUG GAC CAUG GACGCA UGG A |||| | ||||| ||| ||| |||| |||||| ||| A AAGU U UUUAG CAU CUG GUAC CUGCGU ACC A UC CU GG AG GCCUU --- --C UU AAAGUAAGAAGAAG |
Stem-loop sequence | UUCAAGAAGAAGUUAGUGAGAUUGACAAACAUGAUUGACGCAUGGGCCGAAAAACAGAUAAAGAAGAAGAAUGAAACCAUUUGCGUCCCAUGGUCUUCCGUACGAGAUUUGGUUCUGAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017754157.1 |
|
1.5 | PREDICTED: Gossypium arboreum protein DMR6-LIKE OXYGENASE 1 (LOC108455617), mRNA | protein DMR6-LIKE OXYGENASE 1(LOC108455617) | coding protein | psRNATarget |