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BaseInfo

ncRNA ID	ath-miRf11110-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UACUCGACUAGGGGGUCGAGUAAU - NA
Stem-loop(if miRNA)	C     GG            G   U -G  U UACU GACUA  GGGUCGAGUAAU UCA C  AG G |||| |||||  |||||||||||| ||| |  || GUGA CUGGU  UCCAGCUCAUUG AGU G  UC G     U     GG            G   C AG  C
Stem-loop sequence	UACUCGACUAGGGGGUCGAGUAAUGUCAUCGAGUGGCCUGAGCUGAGGUUACUCGACCUGGUGGUCUAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY231407.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   |**||||||||||||||||*|||| targets:443   ACCACUCGACCCCCUAGUCAAGUA   466 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT025674.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   *||||||||||||||=|||||||| targets:307   CUUACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UA-AUGAGCUGGGGGAUCAGCUCAU   1   ||-|||||||||||||=|||||||| targets:179   AUCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   =**||||||||||||=|||||||| targets:229   GCCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UA-AUGAGCUGGGGGAUCAGCUCAU   1   ||-|||||||||||||=|||||||| targets:179   AUCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   =**||||||||||||=|||||||| targets:229   GCCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   ||*||||||||||||=|||||||| targets:1570   AUCACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   |**||||||||||||=|||||||| targets:89   ACCACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   |**||||||||||||=|||||||| targets:123   ACCACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   |**||||||||||||=|||||||| targets:498   ACCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   |**||||||||||||=|||||||| targets:498   ACCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   |||||*|||||||||=|||||||| targets:582   AUUACYCGACCCCCUGGUCGAGUA   605 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   =||||||*|||||||=|||||||| targets:300   GUUACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UAAUGAGCUGGGGGAUCAGCUCAU   1   =||||||*|||||||=|||||||| targets:300   GUUACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget