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BaseInfo

ncRNA ID novel_gar_miR1691
Species Gossypium arboreum
Class miRNA
Genome position Chr3:27780857-27780983 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 23
Mature sequence(if miRNA) 1 - AAGCUACUAUCUUGGAAUUUCAA - 23
Stem-loop(if miRNA) --            A      --  ----------   ------      -UU    U  CACU  UC   UU
  GAAAUUUCGAGA AGUAGU  GC          CCU      AACUUA   GGGU GC    UU  UCG  G
  |||||||||||| ||||||  ||          |||      ||||||   |||| ||    ||  |||  A
  CUUUAAGGUUCU UCAUCG  CG          GGA      UUGAAU   CCCA CG    AA  AGC  A
AA            A      AA  UAAAUCUUUU   AAUUUU      CCU    -  AAUU  UA   UU
Stem-loop sequence GAAAUUUCGAGAAAGUAGUGCCCUAACUUAUUGGGUUGCCACUUUUCUCGUUGAAUUCGAAUAAUUAAGCACCCUCCUAAGUUUUUUAAAGGUUUUCUAAAUGCAAGCUACUAUCUUGGAAUUUCAA