ncRNA ID | novel_gar_miR1686 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:66937452-66937629 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180720 |
Length | 24 |
Mature sequence(if miRNA) | 155 - UGUUUAUAAUUUGAUCCACGUAUG - 178 |
Stem-loop(if miRNA) |
--G UA                  UU  G    -CC   AAGUAUA     C      A   CG -GU                -  AA  AA    A  UGGAUCAAAUUGUAAACA  UG AUAC   ACA       GAUAA UUAAAU UGG  G   UAAAAAAAAAGGAGUA UC  UA  U    |  ||||||||||||||||||  || ||||   |||       ||||| |||||| |||  |   |||||||||||||||| ||  ||    U  ACCUAGUUUAAUAUUUGU  AU UAUG   UGU       CUGUU AAUUUA ACU  U   AUUUUUUUUUCCUUAU AG  GU  U GUA GC                  UU  A    AAU   -----AC     A      A   AU AAU                C  GG  AU |
Stem-loop sequence | GAUAUGGAUCAAAUUGUAAACAUUUGGAUACCCACAAAGUAUAGAUAACUUAAAUAUGGCGGGUUAAAAAAAAAGGAGUAUCAAUAAAUUUAUGGGGACUAUUCCUUUUUUUUUAUAAUUAUCAAAUUUAAAUUGUCCAUGUUAAGUAUAUAUUUGUUUAUAAUUUGAUCCACGUAUG |