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BaseInfo

ncRNA ID novel_gar_miR1686
Species Gossypium arboreum
Class miRNA
Genome position Chr2:66937452-66937629 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 155 - UGUUUAUAAUUUGAUCCACGUAUG - 178
Stem-loop(if miRNA) --G UA                  UU  G    -CC   AAGUAUA     C      A   CG -GU                -  AA  AA
   A  UGGAUCAAAUUGUAAACA  UG AUAC   ACA       GAUAA UUAAAU UGG  G   UAAAAAAAAAGGAGUA UC  UA  U
   |  ||||||||||||||||||  || ||||   |||       ||||| |||||| |||  |   |||||||||||||||| ||  ||
   U  ACCUAGUUUAAUAUUUGU  AU UAUG   UGU       CUGUU AAUUUA ACU  U   AUUUUUUUUUCCUUAU AG  GU  U
GUA GC                  UU  A    AAU   -----AC     A      A   AU AAU                C  GG  AU
Stem-loop sequence GAUAUGGAUCAAAUUGUAAACAUUUGGAUACCCACAAAGUAUAGAUAACUUAAAUAUGGCGGGUUAAAAAAAAAGGAGUAUCAAUAAAUUUAUGGGGACUAUUCCUUUUUUUUUAUAAUUAUCAAAUUUAAAUUGUCCAUGUUAAGUAUAUAUUUGUUUAUAAUUUGAUCCACGUAUG