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BaseInfo

ncRNA ID novel_gar_miR1676
Species Gossypium arboreum
Class miRNA
Genome position Chr1:63022715-63022846 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180720
Length 24
Mature sequence(if miRNA) 1 - AGUGGAUGAUGAACUAUGUAUGUG - 24
Stem-loop(if miRNA) --A          AA        GUGU  -C          U  UG  AGUAAAAACCUG     GAAUA   A
   GUGGAUGAUG  CUAUGUAU    GA  UCGUAUACUU GA  UA            AGUUU     GAU A
   ||||||||||  ||||||||    ||  |||||||||| ||  ||            |||||     ||| G
   CACUUACUAC  GAUGUAUA    CU  AGCAUAUGGA UU  GU            UCAAA     CUA A
UAA          --        ACUU  UC          -  GU  ----------GA     ---AG   A
Stem-loop sequence AGUGGAUGAUGAACUAUGUAUGUGUGACUCGUAUACUUUGAUGUAAGUAAAAACCUGAGUUUGAAUAGAUAAGAAAUCGAAAACUAGUGUGUUAGGUAUACGACUUCUUCAAUAUGUAGCAUCAUUCACAAU