| ncRNA ID | novel_gar_miR1674 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr12:102092638-102092846 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586 |
| Length | 24 |
| Mature sequence(if miRNA) | 186 - AUGGAUUGCUGACAUGGCACAUUG - 209 |
| Stem-loop(if miRNA) |
-- C C -------- GU G --G AUAA AUG GAAUU CAAAACU AUGGAUUG UGA AUGGCACAU UGAGUGAUUG G GUGGCAUUUUU GUUGACUUUUGA AGUUUAGGGAC UUUA AGUC U |||||||| ||| ||||||||| |||||||||| | ||||||||||| |||||||||||| ||||||||||| |||| |||| U UGCCUAAC AUU UACUGUGUA ACUCAUUAAC U UAUUGUAAGAA UAACUGGAAACU UCGAAUCCCUG AGAU UCAG U AU A A AUCGAAUA UG A AAA GAGA AAA --AUU AUCCCCC |
| Stem-loop sequence | AUGGAUUGCUGACAUGGCACAUUGAGUGAUUGGUGGGUGGCAUUUUUGGUUGACUUUUGAAUAAAGUUUAGGGACAUGUUUAGAAUUAGUCCAAAACUUUUCCCCCUAGACUUUAUAGAAAAGUCCCUAAGCUAGAGUCAAAGGUCAAUAAAAAGAAUGUUAUAUGUCAAUUACUCAAUAAGCUAAUGUGUCAUAUUAACAAUCCGUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752977.1 |
|
2.5 | PREDICTED: Gossypium arboreum probable ubiquitin-like-specific protease 2A (LOC108454497), transcript variant X2, mRNA | probable ubiquitin-like-specific protease 2A(LOC108454497) | coding protein | psRNATarget | |||||||||
| XM_017752976.1 |
|
2.5 | PREDICTED: Gossypium arboreum probable ubiquitin-like-specific protease 2A (LOC108454497), transcript variant X1, mRNA | probable ubiquitin-like-specific protease 2A(LOC108454497) | coding protein | psRNATarget |